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 Siavash Mirarab

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Average citations per article11.11
Citation Count100
Publication count9
Publication years2007-2014
Available for download1
Average downloads per article696.00
Downloads (cumulative)696
Downloads (12 Months)35
Downloads (6 Weeks)11
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10 results found Export Results: bibtexendnoteacmrefcsv

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1
September 2018 IEEE/ACM Transactions on Computational Biology and Bioinformatics (TCBB): Volume 15 Issue 5, September 2018
Publisher: IEEE Computer Society Press
Bibliometrics:
Citation Count: 0
Downloads (6 Weeks): 8,   Downloads (12 Months): 15,   Downloads (Overall): 15

Full text available: PDFPDF
Species tree reconstruction from genomic data is increasingly performed using methods that account for sources of gene tree discordance such as incomplete lineage sorting. One popular method for reconstructing species trees from unrooted gene tree topologies is ASTRAL. In this paper, we derive theoretical sample complexity results for the number ...

2
April 2014 RECOMB 2014: Proceedings of the 18th Annual International Conference on Research in Computational Molecular Biology - Volume 8394
Publisher: Springer-Verlag New York, Inc.
Bibliometrics:
Citation Count: 0

In this paper, we introduce a new and highly scalable algorithm, PASTA, for large-scale multiple sequence alignment estimation. PASTA uses a new technique to produce an alignment given a guide tree that enables it to be both highly scalable and very accurate. We present a study on biological and simulated ...
Keywords: Ultra-large, Multiple sequence alignment, SATé

3
July 2012 IEEE Transactions on Software Engineering: Volume 38 Issue 4, July 2012
Publisher: IEEE Press
Bibliometrics:
Citation Count: 0

To ensure that a modified software system has not regressed, one approach is to rerun existing test cases. However, this is a potentially costly task. To mitigate the costs, the testing effort can be optimized by executing only a selected subset of the test cases that are believed to have ...
Keywords: Software regression testing, test case selection, integer programming, Pareto optimality

4
December 2011 Bioinformatics: Volume 27 Issue 23, December 2011
Publisher: Oxford University Press
Bibliometrics:
Citation Count: 1

Motivation: Multiple sequence alignment is a basic part of much biological research, including phylogeny estimation and protein structure and function prediction. Different alignments on the same set of unaligned sequences are often compared, sometimes in order to assess the accuracy of alignment methods or to infer a consensus alignment from ...

5
September 2010 IEEE Transactions on Software Engineering: Volume 36 Issue 5, September 2010
Publisher: IEEE Press
Bibliometrics:
Citation Count: 32

Regression testing is an expensive process used to validate modified software. Test case prioritization techniques improve the cost-effectiveness of regression testing by ordering test cases such that those that are more important are run earlier in the testing process. Many prioritization techniques have been proposed and evidence shows that they ...
Keywords: Regression testing, Regression testing, test case prioritization, cost-benefits, Bayesian networks, empirical studies., cost-benefits, empirical studies., Bayesian networks, test case prioritization

6 published by ACM
November 2008 SIGSOFT '08/FSE-16: Proceedings of the 16th ACM SIGSOFT International Symposium on Foundations of software engineering
Publisher: ACM
Bibliometrics:
Citation Count: 22
Downloads (6 Weeks): 3,   Downloads (12 Months): 20,   Downloads (Overall): 681

Full text available: PDFPDF
Regression testing is an expensive process used to validate modified software. Test case prioritization techniques improve the cost-effectiveness of regression testing by ordering test cases such that those that are more important are run earlier in the testing process. Many prioritization techniques have been proposed and evidence shows that they ...
Keywords: empirical studies, regression testing, test case prioritization

7
April 2008 ICST '08: Proceedings of the 2008 International Conference on Software Testing, Verification, and Validation
Publisher: IEEE Computer Society
Bibliometrics:
Citation Count: 6

A cost effective approach to regression testing is to prioritize test cases from a previous version of a software system for the current release. We have previously introduced a new approach for test case prioritization using Bayesian Networks (BN) which integrates different types of information to estimate the probability of ...
Keywords: Test Case Prioritization, Empirical Study, Regression Testing

8
March 2008 ICAS '08: Proceedings of the Fourth International Conference on Autonomic and Autonomous Systems
Publisher: IEEE Computer Society
Bibliometrics:
Citation Count: 4

The planning process in autonomic software aims at selecting an action from a finite set of alternatives for adaptation. This is an abstruse problem due to the fact that software behavior is usually very complex with numerous number of control variables. This research work focuses on proposing a planning process ...
Keywords: Self Adaptive Software, Reinforcement Learning, Action Selection

9
June 2007 ICPC '07: Proceedings of the 15th IEEE International Conference on Program Comprehension
Publisher: IEEE Computer Society
Bibliometrics:
Citation Count: 8

During software evolution, developers modify various modules to handle new requirements or to fix existing bugs. Such changes usually propagate to related modules throughout the system. Program comprehension techniques are able to predict this change propagation phenomenon. In this paper, we introduce a novel approach that predicts the possible affected ...

10
March 2007 FASE'07: Proceedings of the 10th international conference on Fundamental approaches to software engineering
Publisher: Springer-Verlag
Bibliometrics:
Citation Count: 10

An important aspect of regression testing is to prioritize the test cases which need to be ordered to execute based on specific criteria. This research work presents a novel approach to prioritizing test cases in order to enhance the rate of fault detection. Our approach is based on probability theory ...
Keywords: bayesian networks, regression testing, test case prioritization



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