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 Yu Zheng

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Average citations per article1.00
Citation Count4
Publication count4
Publication years2011-2017
Available for download2
Average downloads per article76.00
Downloads (cumulative)152
Downloads (12 Months)129
Downloads (6 Weeks)8
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4 results found Export Results: bibtexendnoteacmrefcsv

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1 published by ACM
August 2017 Journal of the ACM (JACM): Volume 64 Issue 4, September 2017
Publisher: ACM
Bibliometrics:
Citation Count: 0
Downloads (6 Weeks): 8,   Downloads (12 Months): 122,   Downloads (Overall): 122

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By reconciling the phylogenetic tree of a gene family with the corresponding species tree, it is possible to infer lineage-specific duplications and losses with high confidence and hence to annotate orthologs and paralogs. The currently available reconciliation methods for nonbinary gene trees are computationally expensive for genome-scale applications. We present ...
Keywords: tree reconciliation, Gene duplication history

2
May 2014 IEEE/ACM Transactions on Computational Biology and Bioinformatics (TCBB): Volume 11 Issue 3, May/June 2014
Publisher: IEEE Computer Society Press
Bibliometrics:
Citation Count: 0
Downloads (6 Weeks): 0,   Downloads (12 Months): 7,   Downloads (Overall): 30

Full text available: PDFPDF
In the tree reconciliation approach to infer the duplication history of a gene family, the gene (family) tree is compared to the corresponding species tree. Incomplete lineage sorting (ILS) gives rise to stochastic variation in the topology of a gene tree and hence likely introduces false duplication events when a ...
Keywords: gene tree and species tree reconciliation, gene duplication, incomplete lineage sorting

3
April 2014 RECOMB 2014: Proceedings of the 18th Annual International Conference on Research in Computational Molecular Biology - Volume 8394
Publisher: Springer-Verlag New York, Inc.
Bibliometrics:
Citation Count: 1

By reconciling the phylogenetic tree of a gene family with the corresponding species tree, it is possible to infer lineage-specific duplications and losses with high confidence and hence annotate orthologs and paralogs. However, the currently available reconciliation methods for non-binary gene trees are computationally expensive for being applied on a ...

4
February 2011 ICCABS '11: Proceedings of the 2011 IEEE 1st International Conference on Computational Advances in Bio and Medical Sciences
Publisher: IEEE Computer Society
Bibliometrics:
Citation Count: 2

Background: Horizontal gene transfer and gene duplication are two significant forces behind genome evolution. As more and more well-supported examples of HGTs are being revealed, there is a growing awareness that HGT is more widespread than previously thought, occurring often not only within bacteria, but also between species remotely related ...



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